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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs7579931 chr2:132263162 T/C CCDC74B chr2:130896860-130902707:- 0.41 7.38 6.97E-13 Box Plot
THCA rs75811775 chr5:49841652 G/C LOC647121 chr1:121260910-121313686:+ -0.38 -7.73 6.19E-14 Box Plot
THCA rs7581778 chr2:132259421 A/G CCDC74B chr2:130896860-130902707:- 0.4 7.2 2.42E-12 Box Plot
THCA rs7583091 chr2:101106612 A/G LOC285359 chr3:101431278-101432259:+ 0.36 6.94 1.26E-11 Box Plot
THCA rs7583325 chr2:101150558 C/G LOC285359 chr3:101431278-101432259:+ 0.35 6.6 1.08E-10 Box Plot
THCA rs7583810 chr2:132209379 G/A CCDC74B chr2:130896860-130902707:- 0.38 6.63 9.31E-11 Box Plot
THCA rs7583919 chr2:132209435 G/T CCDC74B chr2:130896860-130902707:- 0.37 6.57 1.31E-10 Box Plot
THCA rs7583920 chr2:132239524 G/T TUBA3E chr2:130949316-130956034:- 0.54 6.23 1.0E-9 Box Plot
THCA rs7585474 chr2:132259751 T/G CCDC74B chr2:130896860-130902707:- 0.4 7.16 3.0E-12 Box Plot
THCA rs75856161 chr7:65054858 CTT/C RABGEF1 chr7:66147151-66276451:+ 0.51 6.71 5.52E-11 Box Plot
THCA rs75863441 chr2:101143924 T/G LOC285359 chr3:101431278-101432259:+ 0.36 6.11 2.07E-9 Box Plot
THCA rs7586685 chr2:113284205 G/A RGPD5 chr2:110550335-110615272:+ -0.5 -7.06 5.79E-12 Box Plot
THCA rs7586893 chr2:112959967 C/T RGPD5 chr2:110550335-110615272:+ -0.53 -7.44 4.59E-13 Box Plot
THCA rs7587316 chr2:113026020 T/C RGPD5 chr2:110550335-110615272:+ -0.48 -6.92 1.44E-11 Box Plot
THCA rs7587860 chr2:101199879 G/A LOC285359 chr3:101431278-101432259:+ 0.35 6.92 1.42E-11 Box Plot